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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
29
ATAC-seq
11
ChIP-seq
1
DNAme array
1
total RNA-seq
Assay category
29
DNA accessibility
11
DNA binding
1
DNA methylation
1
Transcription
Target of assay
6
histone
6
histone modification
4
narrow histone mark
4
transcription factor
2
broad histone mark
1
control
Date released
406
November, 2017
322
August, 2017
298
October, 2019
218
June, 2019
152
May, 2020
120
May, 2019
117
February, 2021
94
December, 2017
88
November, 2018
87
February, 2023
80
April, 2019
74
October, 2018
47
September, 2018
43
July, 2019
42
May, 2021
41
November, 2019
38
August, 2021
35
December, 2018
25
January, 2019
24
February, 2018
22
October, 2017
19
March, 2020
11
September, 2017
8
January, 2018
4
July, 2018
2
May, 2022
2
November, 2020
1
August, 2018
1
August, 2022
1
December, 2019
1
May, 2023
1
October, 2022
Available data
142
bam
128
bigWig
tsv
19
bed narrowPeak
6
tagAlign
Organism
42
Homo sapiens
Biosample type
19
primary cell
17
cell line
6
in vitro differentiated cells
Organ
20
epithelium
20
pancreas
Project
41
AMP
1
T1D
Genome assembly (visualization)
19
GRCh38
19
hg19
Lab
184
Kyle Gaulton, UCSD
42
AMP-T2D consortium
Audit category:
20
inconsistent ontology term
files.file_type!
tsv
BIOSAMPLE
ASSAY
42 results
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Clear Filters
ATAC-seq
ChIP-seq
DNAme array
total RNA-seq
primary cell
monocyte
13
1
1
1
naive thymus-derived CD4-positive, alpha-beta T cell
2
neutrophil
1
cell line
EndoC_BH1
16
1
in vitro differentiated cells
cardiomyocytes
3
pancreatic PP cell
3
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