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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
131
ChIP-seq
123
total RNA-seq
29
ATAC-seq
1
DNAme array
Assay category
131
DNA binding
123
Transcription
29
DNA accessibility
1
DNA methylation
Target of assay
98
histone
98
histone modification
60
broad histone mark
38
narrow histone mark
24
control
9
transcription factor
5
RNA binding protein
Date released
670
February, 2021
411
August, 2017
406
November, 2017
314
October, 2019
296
May, 2020
218
June, 2019
168
July, 2018
164
May, 2021
151
August, 2021
120
May, 2019
108
July, 2019
103
February, 2023
94
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
64
March, 2020
61
November, 2019
49
April, 2018
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
22
October, 2017
11
September, 2017
10
December, 2019
8
January, 2018
6
November, 2020
4
August, 2018
3
June, 2018
2
May, 2022
1
August, 2022
1
May, 2023
1
October, 2022
Available data
262
bam
225
bigWig
122
tsv
116
bed narrowPeak
97
bigBed narrowPeak
6
tagAlign
Organism
284
Homo sapiens
Biosample type
153
tissue
85
in vitro differentiated cells
25
primary cell
21
cell line
Organ
62
pancreas
50
blood vessel
50
vasculature
31
epithelium
28
brain
24
heart
7
limb
7
musculature of body
5
artery
5
kidney
2
embryo
1
connective tissue
Project
283
AMP
1
T1D
Genome assembly (visualization)
238
hg19
237
GRCh38
Lab
284
AMP-T2D consortium
235
Kyle Gaulton, UCSD
Audit category:
92
inconsistent ontology term
BIOSAMPLE
ASSAY
284 results
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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
DNAme array
tissue
islet of Langerhans
36
ascending aorta
16
thoracic aorta
16
temporal lobe
15
angular gyrus
13
+ See 9 more…
in vitro differentiated cells
cardiomyocytes
3
59
induced pluripotent stem cell
9
pancreatic PP cell
3
cardiac fibroblast
1
cardiomyocytes (cardiac muscle cell)
1
+ See 9 more…
primary cell
monocyte
1
1
13
1
kidney epithelial cell
5
naive thymus-derived CD4-positive, alpha-beta T cell
2
embryonic stem cell
1
neutrophil
1
cell line
EndoC_BH1
1
4
16
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