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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
67
total RNA-seq
16
ATAC-seq
6
WGBS
4
ChIP-seq
Assay category
67
Transcription
16
DNA accessibility
6
DNA methylation
4
DNA binding
Target of assay
2
histone
2
histone modification
2
narrow histone mark
1
control
1
transcription factor
Date released
188
August, 2017
157
July, 2018
104
May, 2022
72
September, 2018
61
May, 2021
56
February, 2023
55
November, 2019
53
October, 2018
April, 2018
32
February, 2021
19
September, 2020
18
October, 2019
14
March, 2020
11
September, 2017
10
November, 2020
8
January, 2021
7
August, 2020
7
November, 2018
6
July, 2019
5
March, 2019
5
October, 2017
4
August, 2021
4
June, 2019
3
August, 2018
3
October, 2022
2
May, 2019
1
August, 2022
1
February, 2020
1
June, 2018
Available data
72
tsv
70
bam
69
bigWig
6
fastq
3
bed narrowPeak
3
tagAlign
Organism
93
Homo sapiens
Biosample type
47
cell line
37
tissue
6
primary cell
3
in vitro differentiated cells
Organ
457
connective tissue
386
adipose tissue
151
bone element
93
pancreas
69
heart
66
artery
66
blood vessel
66
vasculature
58
epithelium
8
kidney
8
skeleton
6
limb
3
liver
2
embryo
1
bone marrow
1
thymus
Project
86
AMP
6
HPAP
1
T1D
Genome assembly (visualization)
69
GRCh38
69
hg19
Lab
86
AMP-T2D consortium
6
Klaus Kaestner, Upenn
1
Kyle Gaulton, UCSD
Audit category:
47
inconsistent ontology term
month_released!
April, 2018
BIOSAMPLE
ASSAY
93 results
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Clear Filters
total RNA-seq
ATAC-seq
WGBS
ChIP-seq
cell line
EndoC_BH1
30
16
1
tissue
islet of Langerhans
36
pancreas
1
primary cell
pancreatic alpha cell
6
in vitro differentiated cells
pancreatic PP cell
3
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