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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
33
ChIP-seq
2
total RNA-seq
Assay category
33
DNA binding
2
Transcription
Target of assay
19
transcription factor
12
histone
12
histone modification
6
broad histone mark
6
narrow histone mark
2
RNA binding protein
2
control
Date released
187
June, 2019
33
August, 2017
15
December, 2017
9
November, 2018
8
October, 2019
5
August, 2021
4
February, 2023
4
July, 2019
2
February, 2021
2
May, 2021
2
September, 2017
1
May, 2022
1
November, 2020
Available data
575
bigWig
559
bam
287
fastq
275
bed narrowPeak
262
tsv
175
tagAlign
42
bigBed narrowPeak
41
bed broadPeak
35
bed bed3+
15
bigBed broadPeak
6
bed bedMethyl
6
bigBed bedMethyl
Organism
35
Homo sapiens
Biosample type
26
tissue
7
in vitro differentiated cells
2
primary cell
Organ
19
pancreas
11
connective tissue
4
adipose tissue
3
liver
Project
35
AMP
Genome assembly (visualization)
35
hg19
33
GRCh38
Lab
33
AMP-T2D consortium
2
Kyle Gaulton, UCSD
Audit category:
14
missing controlled_by
Audit category:
4
inconsistent control read length
BIOSAMPLE
ASSAY
35 results
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Clear Filters
ChIP-seq
total RNA-seq
tissue
islet of Langerhans
19
white adipose tissue
4
liver
3
in vitro differentiated cells
adipocyte
7
primary cell
CD8-positive, alpha-beta T cell
2
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