Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
85
ChIP-seq
51
total RNA-seq
17
pCHi-C
16
snATAC-seq
Assay category
85
DNA binding
51
Transcription
16
DNA accessibility
Target of assay
85
histone
85
histone modification
44
broad histone mark
41
narrow histone mark
Date released
153
May, 2021
45
May, 2020
23
February, 2023
16
January, 2021
7
March, 2020
Available data
136
bam
136
bigWig
85
bed narrowPeak
84
tagAlign
51
tsv
Organism
169
Homo sapiens
Biosample type
159
primary cell
9
tissue
1
cell line
Organ
9
pancreas
8
blood
8
bodily fluid
1
bone element
1
bone marrow
1
connective tissue
1
epithelium
1
thymus
Project
246
AMP
169
T1D
Genome assembly (visualization)
136
GRCh38
136
hg19
Lab
168
Kyle Gaulton, UCSD
1
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
BIOSAMPLE
ASSAY
169 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
total RNA-seq
pCHi-C
snATAC-seq
primary cell
monocyte
84
51
1
peripheral blood mononuclear cell
8
CD4-positive, alpha-beta T cell
2
B cell
1
CD8-positive, alpha-beta T cell
1
+ See 11 more…
tissue
islet of Langerhans
4
pancreas
4
thymus
1
cell line
EndoC_BH1
1
See all biosamples
Download