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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
161
total RNA-seq
16
ATAC-seq
4
ChIP-seq
Assay category
161
Transcription
16
DNA accessibility
4
DNA binding
Target of assay
2
histone
2
histone modification
2
narrow histone mark
1
control
1
transcription factor
Date released
147
August, 2017
120
July, 2018
61
May, 2021
55
November, 2019
51
October, 2018
26
February, 2021
24
May, 2022
19
February, 2023
18
October, 2019
14
March, 2020
10
November, 2020
8
January, 2021
7
November, 2018
6
April, 2018
6
July, 2019
6
September, 2017
5
March, 2019
5
October, 2017
4
August, 2021
4
June, 2019
2
May, 2019
1
August, 2022
1
February, 2020
Available data
160
bam
159
bigWig
156
tsv
3
bed narrowPeak
3
tagAlign
2
fastq
Organism
181
Homo sapiens
Biosample type
157
tissue
primary cell
21
cell line
3
in vitro differentiated cells
Organ
181
pancreas
26
epithelium
3
heart
2
embryo
1
connective tissue
1
thymus
Project
180
AMP
1
T1D
Genome assembly (visualization)
159
GRCh38
159
hg19
Lab
180
AMP-T2D consortium
1
Kyle Gaulton, UCSD
Audit category:
21
inconsistent ontology term
biosample_type!
primary cell
BIOSAMPLE
ASSAY
181 results
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Clear Filters
total RNA-seq
ATAC-seq
ChIP-seq
tissue
islet of Langerhans
156
pancreas
1
cell line
EndoC_BH1
4
16
1
in vitro differentiated cells
pancreatic PP cell
3
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