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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
71
ATAC-seq
65
ChIP-seq
18
pCHi-C
9
total RNA-seq
1
DNAme array
Assay category
71
DNA accessibility
65
DNA binding
9
Transcription
1
DNA methylation
Target of assay
29
control
24
histone
24
histone modification
12
broad histone mark
12
narrow histone mark
12
transcription factor
5
RNA binding protein
Date released
259
August, 2021
161
May, 2022
160
February, 2023
141
February, 2021
135
August, 2017
125
November, 2017
97
October, 2019
83
May, 2021
81
May, 2020
59
September, 2020
47
September, 2023
32
March, 2020
31
June, 2019
29
October, 2018
25
February, 2020
23
May, 2019
19
April, 2020
17
December, 2017
17
July, 2019
17
November, 2018
16
January, 2021
15
April, 2019
14
May, 2023
10
November, 2020
10
October, 2017
8
February, 2018
7
August, 2020
5
December, 2018
5
December, 2019
5
January, 2018
5
March, 2023
4
January, 2019
4
July, 2018
4
September, 2017
2
March, 2019
2
November, 2019
1
August, 2018
1
August, 2022
1
October, 2022
1
September, 2018
Available data
24
bam
24
tagAlign
1
tsv
Organism
164
Homo sapiens
Biosample type
79
primary cell
43
in vitro differentiated cells
25
tissue
17
cell line
Organ
24
liver
18
pancreas
17
epithelium
1
bone element
1
bone marrow
1
connective tissue
1
thymus
Project
147
AMP
17
T1D
Genome assembly (visualization)
hg19
483
GRCh38
Lab
104
AMP-T2D consortium
60
Kyle Gaulton, UCSD
Audit category:
17
inconsistent ontology term
assembly!
hg19
BIOSAMPLE
ASSAY
164 results
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Clear Filters
ATAC-seq
ChIP-seq
pCHi-C
total RNA-seq
DNAme array
primary cell
naive thymus-derived CD4-positive, alpha-beta T cell
22
2
1
1
CD4-positive, alpha-beta memory T cell
22
macrophage
11
1
monocyte
1
1
1
1
neutrophil
1
1
1
+ See 11 more…
in vitro differentiated cells
embryonic stem cell
37
5
pancreatic PP cell
1
tissue
liver
23
pancreas
1
thymus
1
cell line
EndoC_BH1
16
HepG2
1
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