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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
41
ChIP-seq
17
pCHi-C
13
ATAC-seq
7
total RNA-seq
1
DNAme array
Assay category
41
DNA binding
13
DNA accessibility
7
Transcription
1
DNA methylation
Target of assay
24
histone
24
histone modification
12
broad histone mark
12
narrow histone mark
12
transcription factor
5
RNA binding protein
5
control
Date released
269
August, 2021
158
February, 2021
150
February, 2023
127
August, 2017
100
May, 2022
97
October, 2019
81
May, 2020
79
May, 2021
72
November, 2017
47
September, 2023
43
March, 2020
40
September, 2020
29
October, 2018
26
November, 2019
25
February, 2020
22
May, 2019
19
April, 2020
19
December, 2017
17
July, 2019
16
January, 2021
15
April, 2019
15
May, 2023
9
October, 2017
8
February, 2018
8
November, 2018
6
June, 2019
6
September, 2017
5
December, 2018
5
March, 2019
5
March, 2023
5
November, 2020
4
December, 2019
4
January, 2019
4
July, 2018
1
August, 2018
1
August, 2022
1
October, 2022
1
September, 2018
Available data
bigWig
267
bam
167
tsv
130
bed narrowPeak
87
tagAlign
2
bed bed3+
Organism
79
Homo sapiens
Biosample type
42
in vitro differentiated cells
35
primary cell
2
tissue
Organ
18
pancreas
epithelium
1
bone element
1
bone marrow
1
connective tissue
1
thymus
Project
62
AMP
17
T1D
Genome assembly (visualization)
13
GRCh38
13
hg19
Lab
60
Kyle Gaulton, UCSD
19
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
organ_slims!
epithelium
files.file_type!
bigWig
BIOSAMPLE
ASSAY
79 results
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Clear Filters
ChIP-seq
pCHi-C
ATAC-seq
total RNA-seq
DNAme array
in vitro differentiated cells
embryonic stem cell
37
5
primary cell
monocyte
1
1
13
1
1
naive thymus-derived CD4-positive, alpha-beta T cell
2
1
CD4-positive, alpha-beta T cell
2
neutrophil
1
1
B cell
1
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tissue
pancreas
1
thymus
1
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