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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
30
DNase-seq
6
total RNA-seq
5
ChIP-seq
Assay category
30
DNA accessibility
6
Transcription
5
DNA binding
Target of assay
2
control
2
histone
2
histone modification
2
narrow histone mark
1
RNA binding protein
1
transcription factor
Date released
92
August, 2021
66
February, 2021
57
April, 2019
40
May, 2024
36
February, 2023
35
June, 2019
25
July, 2019
21
May, 2019
8
October, 2019
7
March, 2020
3
February, 2020
3
May, 2021
Available data
38
bam
36
bigWig
33
bed narrowPeak
33
bigBed narrowPeak
30
bed bed3+
30
bed broadPeak
30
bigBed broadPeak
6
tsv
Organism
41
Homo sapiens
Biosample type
32
tissue
8
primary cell
1
in vitro differentiated cells
Organ
81
kidney
66
pancreas
46
epithelium
45
musculature of body
42
brain
41
heart
35
limb
22
connective tissue
18
ureter
10
vasculature
8
blood vessel
8
eye
4
artery
3
adipose tissue
3
liver
2
embryo
1
bone element
1
bone marrow
1
nerve
1
spinal cord
1
thymus
Project
41
AMP
Genome assembly (visualization)
36
GRCh38
33
hg19
Lab
41
AMP-T2D consortium
Audit category:
5
inconsistent ontology term
BIOSAMPLE
ASSAY
41 results
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DNase-seq
total RNA-seq
ChIP-seq
tissue
heart
18
coronary artery
2
1
heart left ventricle
3
right atrium auricular region
2
1
cardiac atrium
1
+ See 4 more…
primary cell
cardiac fibroblast
3
5
in vitro differentiated cells
cardiac fibroblast
1
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