Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
52
ChIP-seq
17
pCHi-C
8
total RNA-seq
5
ATAC-seq
1
DNAme array
Assay category
52
DNA binding
8
Transcription
5
DNA accessibility
1
DNA methylation
Target of assay
54
histone
54
histone modification
32
broad histone mark
narrow histone mark
12
transcription factor
8
control
5
RNA binding protein
Date released
264
August, 2021
149
February, 2023
137
February, 2021
96
May, 2022
83
May, 2021
79
August, 2017
58
May, 2020
47
September, 2023
40
March, 2020
40
September, 2020
37
October, 2019
25
May, 2024
24
February, 2020
24
July, 2019
19
April, 2020
15
May, 2023
8
January, 2018
8
January, 2021
6
October, 2017
5
December, 2019
5
March, 2023
5
November, 2017
1
August, 2018
1
December, 2018
1
November, 2018
1
October, 2022
1
September, 2018
Available data
210
bigWig
bam
133
tsv
80
bed narrowPeak
47
tagAlign
2
bed bed3+
Organism
83
Homo sapiens
Biosample type
45
primary cell
37
in vitro differentiated cells
1
tissue
Organ
pancreas
16
epithelium
1
bone element
1
bone marrow
1
connective tissue
1
thymus
Project
66
AMP
17
T1D
Genome assembly (visualization)
30
hg19
Lab
79
Kyle Gaulton, UCSD
4
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
target.investigated_as!
narrow histone mark
organ_slims!
pancreas
files.file_type!
bam
BIOSAMPLE
ASSAY
83 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
pCHi-C
total RNA-seq
ATAC-seq
DNAme array
primary cell
CD8-positive, alpha-beta T cell
23
1
2
monocyte
1
1
1
CD4-positive, alpha-beta T cell
2
naive thymus-derived CD4-positive, alpha-beta T cell
1
1
neutrophil
1
1
+ See 10 more…
in vitro differentiated cells
embryonic stem cell
27
5
5
tissue
thymus
1
See all biosamples
Download