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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
177
ATAC-seq
22
snATAC-seq
Assay category
250
Transcription
199
DNA accessibility
50
DNA binding
41
DNA methylation
Date released
187
June, 2019
105
February, 2023
100
May, 2020
99
May, 2022
82
August, 2021
49
February, 2021
34
May, 2021
33
October, 2019
26
November, 2019
16
January, 2021
14
September, 2018
11
August, 2017
11
May, 2023
10
April, 2020
10
November, 2018
8
July, 2019
8
October, 2017
7
August, 2020
5
September, 2017
4
March, 2019
4
March, 2020
3
January, 2018
3
September, 2020
2
November, 2020
1
August, 2022
Available data
65
bigWig
63
bam
60
zippedFastqFolder
38
bed narrowPeak
18
fastq
1
bed bed3+
1
txt
Organism
199
Homo sapiens
Biosample type
160
primary cell
39
tissue
Organ
57
pancreas
39
epithelium
20
liver
1
musculature of body
Project
139
AMP
60
HPAP
Genome assembly (visualization)
84
hg19
Lab
101
AMP-T2D consortium
60
Klaus Kaestner, Upenn
20
Karen Mohlke, UNC
18
Kyle Gaulton, UCSD
Audit category:
4
inconsistent ontology term
1
audit script error
BIOSAMPLE
ASSAY
199 results
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ATAC-seq
snATAC-seq
primary cell
CD4-positive, alpha-beta memory T cell
22
naive thymus-derived CD4-positive, alpha-beta T cell
22
pancreatic alpha cell
22
Langerhans cell
21
pancreatic beta cell
13
+ See 27 more…
tissue
liver
20
islet of Langerhans
18
skeletal muscle tissue
1
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