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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
103
ATAC-seq
22
snATAC-seq
Assay category
125
DNA accessibility
80
Transcription
41
DNA methylation
13
DNA binding
2
3D chromatin structure
Date released
187
June, 2019
105
February, 2023
100
May, 2020
99
May, 2022
82
August, 2021
49
February, 2021
34
May, 2021
33
October, 2019
26
November, 2019
16
January, 2021
14
September, 2018
11
August, 2017
11
May, 2023
10
April, 2020
10
November, 2018
8
July, 2019
8
October, 2017
7
August, 2020
5
September, 2017
4
March, 2019
4
March, 2020
3
January, 2018
3
September, 2020
2
November, 2020
1
August, 2022
Available data
64
bed narrowPeak
60
zippedFastqFolder
44
bam
20
bigWig
18
fastq
1
bed bed3+
1
txt
Organism
125
Homo sapiens
Biosample type
60
primary cell
59
tissue
5
in vitro differentiated cells
1
cell line
Organ
77
pancreas
40
epithelium
20
liver
1
adipose tissue
1
connective tissue
1
musculature of body
Project
65
AMP
60
HPAP
Genome assembly (visualization)
65
hg19
26
GRCh38
Lab
60
Klaus Kaestner, Upenn
27
AMP-T2D consortium
20
Karen Mohlke, UNC
18
Kyle Gaulton, UCSD
Audit category:
7
inconsistent ontology term
1
audit script error
BIOSAMPLE
ASSAY
125 results
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Clear Filters
ATAC-seq
snATAC-seq
primary cell
pancreatic alpha cell
22
Langerhans cell
21
pancreatic beta cell
13
pancreatic acinar cell
4
tissue
islet of Langerhans
37
liver
20
adipose tissue(adipose white tissue)
1
skeletal muscle tissue
1
in vitro differentiated cells
Pancreatic progenitors (progenitor cell of endocrine pancreas)
5
cell line
EndoC_BH1
1
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