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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
83
ATAC-seq
70
total RNA-seq
53
WGBS
37
single cell RNA-seq
22
snATAC-seq
18
small RNA-seq
15
RRBS
8
Hi-C
2
FAIRE-seq
Assay category
70
Transcription
22
DNA accessibility
Date released
572
February, 2021
190
May, 2020
182
May, 2021
120
July, 2018
95
February, 2023
89
August, 2017
80
August, 2021
48
May, 2022
44
July, 2019
30
October, 2019
26
September, 2018
25
February, 2020
20
November, 2019
16
January, 2021
16
September, 2020
15
February, 2018
15
March, 2020
10
April, 2020
6
April, 2018
5
December, 2019
5
January, 2019
4
November, 2020
2
October, 2018
1
August, 2022
1
May, 2023
Available data
50
bam
44
bigWig
44
tsv
21
zippedFastqFolder
7
txt
6
fastq
1
bed bed3+
Organism
92
Homo sapiens
Biosample type
58
tissue
34
primary cell
Organ
24
liver
13
connective tissue
10
heart
9
adipose tissue
8
pancreas
5
blood vessel
5
epithelium
5
kidney
5
vasculature
4
brain
3
musculature of body
2
artery
1
pericardium
Project
71
AMP
21
HPAP
Genome assembly (visualization)
45
hg19
44
GRCh38
Lab
45
AMP-T2D consortium
21
Klaus Kaestner, Upenn
20
Karen Mohlke, UNC
6
Kyle Gaulton, UCSD
Audit category:
1
audit script error
BIOSAMPLE
ASSAY
92 results
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Clear Filters
total RNA-seq
snATAC-seq
tissue
liver
22
islet of Langerhans
6
omental fat pad
4
subcutaneous adipose tissue
4
body of pancreas
2
+ See 14 more…
primary cell
Langerhans cell
21
cardiac atrium fibroblast
1
cardiac ventricle fibroblast
1
endothelial cell of coronary artery
1
epithelial cell of proximal tubule
1
+ See 9 more…
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