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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
208
total RNA-seq
165
ChIP-seq
111
ATAC-seq
41
WGBS
34
single cell RNA-seq
22
snATAC-seq
17
pCHi-C
1
DNAme array
Assay category
208
Transcription
Date released
545
February, 2021
190
May, 2020
182
May, 2021
120
July, 2018
93
February, 2023
89
August, 2017
74
August, 2021
44
July, 2019
30
October, 2019
26
May, 2022
26
September, 2018
25
February, 2020
20
November, 2019
16
September, 2020
15
February, 2018
15
March, 2020
5
December, 2019
5
January, 2019
4
November, 2020
2
October, 2018
1
May, 2023
Available data
179
bam
175
bigWig
173
tsv
6
fastq
6
txt
2
bed bed3+
Organism
208
Homo sapiens
Biosample type
84
in vitro differentiated cells
65
tissue
55
primary cell
4
cell line
Organ
47
pancreas
20
liver
6
epithelium
3
heart
2
embryo
1
connective tissue
Project
157
AMP
51
T1D
Genome assembly (visualization)
175
hg19
173
GRCh38
Lab
123
AMP-T2D consortium
65
Kyle Gaulton, UCSD
20
Karen Mohlke, UNC
Audit category:
69
inconsistent ontology term
BIOSAMPLE
ASSAY
208 results
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total RNA-seq
in vitro differentiated cells
cardiomyocytes
59
induced pluripotent stem cell
9
embryonic stem cell
5
cardiac fibroblast
1
cardiomyocytes (cardiac muscle cell)
1
+ See 9 more…
tissue
islet of Langerhans
42
liver
20
cardiac atrium
1
cardiac ventricle
1
pancreas
1
primary cell
monocyte
52
CD8-positive, alpha-beta T cell
2
embryonic stem cell
1
cell line
EndoC_BH1
4
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