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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
46
ATAC-seq
26
total RNA-seq
15
ChIP-seq
1
single cell RNA-seq
1
snATAC-seq
Assay category
47
DNA accessibility
27
Transcription
15
DNA binding
Target of assay
12
histone
12
histone modification
10
broad histone mark
3
control
2
narrow histone mark
Date released
670
February, 2021
411
August, 2017
406
November, 2017
319
August, 2021
314
October, 2019
296
May, 2020
246
May, 2021
218
June, 2019
168
July, 2018
120
May, 2019
108
July, 2019
106
February, 2023
94
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
66
May, 2022
61
November, 2019
57
March, 2020
49
April, 2018
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
5
March, 2019
4
August, 2018
3
June, 2018
1
August, 2022
1
October, 2022
Available data
50
bed narrowPeak
41
fastq
39
bam
34
bigWig
14
tagAlign
7
txt
6
bigBed narrowPeak
4
bed broadPeak
1
bed bed3+
Organism
89
Homo sapiens
Biosample type
89
tissue
Organ
40
liver
29
pancreas
16
brain
2
musculature of body
1
adipose tissue
1
connective tissue
1
spleen
Project
134
HPAP
89
AMP
Genome assembly (visualization)
52
hg19
14
GRCh38
Lab
40
Karen Mohlke, UNC
24
AMP-T2D consortium
24
Kyle Gaulton, UCSD
1
Stephen Parker, UMich
Audit category:
1
audit script error
Audit category:
4
missing controlled_by
BIOSAMPLE
ASSAY
89 results
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Clear Filters
ATAC-seq
total RNA-seq
ChIP-seq
single cell RNA-seq
snATAC-seq
tissue
liver
20
20
islet of Langerhans
19
6
brain
15
body of pancreas
4
skeletal muscle tissue
1
1
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