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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
59
ATAC-seq
41
WGBS
34
single cell RNA-seq
22
snATAC-seq
20
total RNA-seq
3
Hi-C
1
MPRA
Assay category
81
DNA accessibility
54
Transcription
41
DNA methylation
3
3D chromatin structure
Date released
270
August, 2021
205
February, 2023
176
May, 2022
143
February, 2021
129
August, 2017
122
May, 2021
64
October, 2019
59
September, 2020
58
May, 2020
48
March, 2020
47
September, 2023
26
July, 2019
25
February, 2020
19
April, 2020
16
January, 2021
15
May, 2023
14
November, 2017
10
November, 2020
8
January, 2018
8
October, 2017
7
August, 2020
5
December, 2019
5
March, 2023
4
July, 2018
4
March, 2019
4
October, 2022
2
November, 2019
1
April, 2019
1
August, 2018
1
August, 2022
1
December, 2018
1
November, 2018
1
September, 2018
Available data
134
zippedFastqFolder
38
bed narrowPeak
bam
24
fastq
20
bigWig
8
txt
3
bedpe bed3+
3
cool
3
hic
1
bed bed3+
Organism
179
Homo sapiens
Biosample type
137
primary cell
42
tissue
1
cell line
Organ
83
epithelium
83
pancreas
40
liver
2
musculature of body
Project
137
HPAP
43
AMP
Genome assembly (visualization)
24
hg19
Lab
137
Klaus Kaestner, Upenn
40
Karen Mohlke, UNC
3
AMP-T2D consortium
Audit category:
4
audit script error
files.file_type!
bam
BIOSAMPLE
ASSAY
180 results
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Clear Filters
ATAC-seq
WGBS
single cell RNA-seq
snATAC-seq
total RNA-seq
Hi-C
MPRA
primary cell
Langerhans cell
33
21
pancreatic alpha cell
22
25
1
pancreatic beta cell
13
16
1
pancreatic acinar cell
4
1
tissue
liver
20
20
skeletal muscle tissue
1
1
cell line
MIN6
1
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