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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
112
ATAC-seq
41
WGBS
34
single cell RNA-seq
28
total RNA-seq
23
ChIP-seq
22
snATAC-seq
1
pCHi-C
Assay category
134
DNA accessibility
62
Transcription
41
DNA methylation
23
DNA binding
Target of assay
23
control
Date released
272
August, 2021
202
February, 2023
180
May, 2022
164
February, 2021
139
August, 2017
107
October, 2019
96
May, 2021
81
May, 2020
72
November, 2017
56
September, 2020
47
September, 2023
44
March, 2020
30
November, 2019
29
October, 2018
25
February, 2020
23
July, 2019
23
May, 2019
22
December, 2017
19
April, 2020
16
January, 2021
15
April, 2019
15
May, 2023
11
November, 2020
9
October, 2017
8
February, 2018
8
June, 2019
8
November, 2018
6
September, 2017
5
December, 2018
5
December, 2019
5
March, 2019
5
March, 2023
4
January, 2019
4
July, 2018
4
October, 2022
1
August, 2018
1
August, 2022
1
September, 2018
Available data
307
bam
bigWig
189
tsv
134
zippedFastqFolder
65
bed narrowPeak
50
tagAlign
24
fastq
7
txt
1
bed bed3+
Organism
261
Homo sapiens
Biosample type
191
primary cell
69
tissue
1
cell line
Organ
104
pancreas
80
epithelium
44
liver
2
musculature of body
Project
134
HPAP
127
AMP
Genome assembly (visualization)
19
hg19
Lab
134
Klaus Kaestner, Upenn
83
AMP-T2D consortium
24
Kyle Gaulton, UCSD
20
Karen Mohlke, UNC
Audit category:
1
audit script error
files.file_type!
bigWig
BIOSAMPLE
ASSAY
261 results
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Clear Filters
ATAC-seq
WGBS
single cell RNA-seq
total RNA-seq
ChIP-seq
snATAC-seq
pCHi-C
primary cell
Langerhans cell
33
21
pancreatic alpha cell
22
25
pancreatic beta cell
13
16
naive thymus-derived CD4-positive, alpha-beta T cell
22
1
CD4-positive, alpha-beta memory T cell
22
+ See 3 more…
tissue
liver
20
23
islet of Langerhans
18
6
skeletal muscle tissue
1
1
cell line
HepG2
1
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