Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
40
ChIP-seq
23
ATAC-seq
6
total RNA-seq
1
Hi-C
Assay category
40
DNA binding
23
DNA accessibility
6
Transcription
1
3D chromatin structure
Target of assay
28
transcription factor
10
control
2
RNA binding protein
2
chromatin remodeller
Date released
324
November, 2017
287
August, 2017
94
December, 2017
88
November, 2018
76
February, 2023
73
September, 2018
60
October, 2018
50
July, 2018
45
February, 2021
44
April, 2018
41
September, 2020
39
February, 2018
35
December, 2018
30
January, 2019
24
May, 2022
17
October, 2017
11
September, 2017
7
August, 2020
5
January, 2018
4
August, 2018
3
June, 2018
1
March, 2019
Available data
134
zippedFastqFolder
73
bed narrowPeak
70
fastq
69
bam
55
bigWig
35
bigBed narrowPeak
7
txt
3
bed bed3+
Organism
70
Homo sapiens
Biosample type
37
tissue
28
cell line
5
primary cell
Organ
35
pancreas
27
blood
27
bodily fluid
7
spleen
5
epithelium
1
liver
Project
70
AMP
Genome assembly (visualization)
55
hg19
37
GRCh38
Lab
46
AMP-T2D consortium
24
Kyle Gaulton, UCSD
Audit category:
1
inconsistent control
BIOSAMPLE
ASSAY
70 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
ATAC-seq
total RNA-seq
Hi-C
tissue
islet of Langerhans
6
18
6
spleen
7
cell line
GM12878
27
HepG2
1
primary cell
pancreatic alpha cell
2
pancreatic beta cell
2
pancreatic acinar cell
1
Download