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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
77
ATAC-seq
48
snATAC-seq
47
WGBS
45
single cell RNA-seq
26
total RNA-seq
Assay category
125
DNA accessibility
71
Transcription
47
DNA methylation
Date released
235
May, 2021
198
May, 2022
168
August, 2021
102
February, 2023
59
September, 2020
47
September, 2023
45
February, 2021
45
May, 2020
19
April, 2020
16
January, 2021
14
May, 2023
10
November, 2020
7
August, 2020
5
March, 2019
5
March, 2023
3
October, 2022
1
October, 2017
Available data
134
zippedFastqFolder
69
fastq
38
bed narrowPeak
24
bam
20
bigWig
6
tsv
6
txt
Organism
243
Homo sapiens
Biosample type
179
primary cell
64
tissue
Organ
110
pancreas
86
epithelium
40
liver
Project
179
HPAP
64
AMP
Genome assembly (visualization)
38
hg19
Lab
AMP-T2D consortium
179
Klaus Kaestner, Upenn
40
Karen Mohlke, UNC
24
Kyle Gaulton, UCSD
Audit category:
27
audit script error
lab.title!
AMP-T2D consortium
BIOSAMPLE
ASSAY
243 results
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ATAC-seq
snATAC-seq
WGBS
single cell RNA-seq
total RNA-seq
primary cell
Langerhans cell
48
45
pancreatic alpha cell
22
31
pancreatic beta cell
13
16
pancreatic acinar cell
4
tissue
liver
20
20
islet of Langerhans
18
6
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