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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
81
ATAC-seq
41
WGBS
33
single cell RNA-seq
26
total RNA-seq
21
snATAC-seq
1
Hi-C
Assay category
102
DNA accessibility
59
Transcription
41
DNA methylation
1
3D chromatin structure
Date released
235
May, 2021
198
May, 2022
168
August, 2021
102
February, 2023
59
September, 2020
47
September, 2023
45
February, 2021
45
May, 2020
19
April, 2020
16
January, 2021
14
May, 2023
10
November, 2020
7
August, 2020
5
March, 2019
5
March, 2023
3
October, 2022
1
October, 2017
Available data
134
zippedFastqFolder
38
bed narrowPeak
25
bam
25
fastq
20
bigWig
6
txt
1
bed broadPeak
1
bedpe
1
hic
Organism
203
Homo sapiens
Biosample type
134
primary cell
69
tissue
Organ
109
pancreas
80
epithelium
40
liver
Project
134
HPAP
69
AMP
Genome assembly (visualization)
41
hg19
2
GRCh38
Lab
134
Klaus Kaestner, Upenn
40
Karen Mohlke, UNC
24
Kyle Gaulton, UCSD
AMP-T2D consortium
2
Bing Ren, UCSD
2
Mark McCarthy, Oxford
1
Maike Sander, UCSD
lab.title!
AMP-T2D consortium
BIOSAMPLE
ASSAY
203 results
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ATAC-seq
WGBS
single cell RNA-seq
total RNA-seq
snATAC-seq
Hi-C
primary cell
Langerhans cell
33
21
pancreatic alpha cell
22
25
pancreatic beta cell
13
16
pancreatic acinar cell
4
tissue
liver
20
20
islet of Langerhans
22
6
1
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