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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
57
total RNA-seq
44
ATAC-seq
16
small RNA-seq
12
WGBS
11
snATAC-seq
10
single cell RNA-seq
6
RRBS
4
Hi-C
2
FAIRE-seq
Assay category
83
Transcription
57
DNA accessibility
18
DNA methylation
4
3D chromatin structure
Date released
667
February, 2021
397
November, 2017
352
August, 2017
315
August, 2021
280
October, 2019
194
May, 2020
193
May, 2021
163
June, 2019
120
July, 2018
117
February, 2023
115
May, 2019
94
December, 2017
87
November, 2018
80
April, 2019
77
July, 2019
74
October, 2018
66
May, 2022
63
March, 2020
61
November, 2019
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
15
May, 2023
10
November, 2020
8
January, 2018
8
January, 2021
6
April, 2018
6
September, 2017
5
December, 2019
5
March, 2019
4
March, 2023
1
August, 2018
1
August, 2022
1
October, 2022
Available data
88
bam
83
bigWig
47
tsv
45
bed narrowPeak
24
fastq
14
bed bedMethyl
14
bigBed bedMethyl
7
txt
2
bigBed narrowPeak
1
bed bed3+
Organism
161
Homo sapiens
Biosample type
primary cell
162
tissue
Organ
48
liver
30
pancreas
20
heart
19
lung
11
brain
10
adipose tissue
10
connective tissue
9
musculature of body
7
blood vessel
7
vasculature
5
limb
4
kidney
1
artery
1
pericardium
Project
143
AMP
19
LungMap
Genome assembly (visualization)
99
hg19
61
GRCh38
Lab
79
AMP-T2D consortium
40
Karen Mohlke, UNC
24
Kyle Gaulton, UCSD
19
Xin Sun, UCSD
Audit category:
1
audit script error
biosample_type!
primary cell
BIOSAMPLE
ASSAY
162 results
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Clear Filters
total RNA-seq
ATAC-seq
small RNA-seq
WGBS
snATAC-seq
single cell RNA-seq
RRBS
Hi-C
FAIRE-seq
tissue
liver
22
20
1
islet of Langerhans
6
18
1
lung
10
9
heart left ventricle
2
2
4
1
omental fat pad
4
1
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