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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
53
ATAC-seq
41
WGBS
34
single cell RNA-seq
32
ChIP-seq
26
total RNA-seq
21
snATAC-seq
Assay category
74
DNA accessibility
60
Transcription
41
DNA methylation
32
DNA binding
Target of assay
32
histone
32
histone modification
17
broad histone mark
15
narrow histone mark
Date released
359
May, 2021
324
November, 2017
170
February, 2021
148
May, 2020
134
May, 2022
127
August, 2017
110
February, 2023
90
August, 2021
73
September, 2018
72
October, 2019
62
November, 2018
59
September, 2020
55
June, 2019
48
July, 2018
46
December, 2017
43
April, 2018
39
February, 2018
31
July, 2019
28
December, 2018
24
March, 2020
23
January, 2019
21
November, 2019
12
November, 2020
8
January, 2021
7
August, 2020
7
December, 2019
6
January, 2018
5
March, 2023
5
May, 2019
5
September, 2017
4
August, 2018
4
October, 2022
3
June, 2018
2
October, 2018
0
April, 2020
Available data
134
zippedFastqFolder
73
fastq
72
bam
72
bigWig
46
bed narrowPeak
26
tsv
14
bigBed narrowPeak
1
csv
Organism
207
Homo sapiens
Biosample type
207
primary cell
tissue
Organ
152
pancreas
141
epithelium
Project
134
HPAP
73
AMP
Genome assembly (visualization)
72
GRCh38
72
hg19
Lab
134
Klaus Kaestner, Upenn
73
AMP-T2D consortium
Audit category:
32
missing controlled_by
biosample_type!
tissue
BIOSAMPLE
ASSAY
207 results
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Clear Filters
ATAC-seq
WGBS
single cell RNA-seq
ChIP-seq
total RNA-seq
snATAC-seq
primary cell
pancreatic alpha cell
25
25
10
Langerhans cell
33
21
pancreatic beta cell
17
16
10
pancreatic ductal cell
4
13
4
pancreatic acinar cell
7
8
2
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