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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
74
ATAC-seq
46
ChIP-seq
15
total RNA-seq
Assay category
74
DNA accessibility
46
DNA binding
15
Transcription
Target of assay
28
transcription factor
16
histone
16
histone modification
9
narrow histone mark
7
broad histone mark
2
RNA binding protein
2
chromatin remodeller
Date released
568
February, 2021
280
November, 2017
276
May, 2021
249
August, 2017
210
June, 2019
207
May, 2020
207
October, 2019
164
July, 2018
105
August, 2021
96
May, 2019
79
July, 2019
79
November, 2018
77
December, 2017
72
September, 2018
64
April, 2019
57
November, 2019
49
April, 2018
47
October, 2018
40
May, 2024
35
February, 2023
31
February, 2018
30
December, 2018
26
January, 2019
16
March, 2020
14
October, 2017
12
May, 2023
7
August, 2020
7
September, 2017
6
November, 2020
5
December, 2019
3
August, 2018
3
June, 2018
3
September, 2020
2
March, 2019
1
March, 2023
0
May, 2022
Available data
120
bed narrowPeak
71
bam
64
xls
61
bigWig
30
bigBed narrowPeak
30
fastq
16
tagAlign
15
tsv
3
bed bed3+
Organism
135
Homo sapiens
Biosample type
67
tissue
35
cell line
30
in vitro differentiated cells
3
primary cell
Organ
64
kidney
27
blood
27
bodily fluid
8
embryo
3
epithelium
3
liver
3
spleen
Project
135
AMP
Genome assembly (visualization)
135
GRCh38
129
hg19
Lab
71
AMP-T2D consortium
64
Katalin Susztak, Upenn
Audit category:
1
inconsistent control
BIOSAMPLE
ASSAY
135 results
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Clear Filters
ATAC-seq
ChIP-seq
total RNA-seq
tissue
kidney
64
spleen
3
cell line
GM12878
27
H1-hESC
8
in vitro differentiated cells
neural progenitor cell
10
13
7
primary cell
hepatocyte
3
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