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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
208
total RNA-seq
165
ChIP-seq
111
ATAC-seq
41
WGBS
34
single cell RNA-seq
22
snATAC-seq
17
pCHi-C
1
DNAme array
Assay category
111
DNA accessibility
Date released
103
February, 2023
100
May, 2020
77
May, 2022
76
August, 2021
34
May, 2021
26
November, 2019
22
February, 2021
22
October, 2019
14
September, 2018
11
May, 2023
8
October, 2017
7
August, 2020
6
July, 2019
5
August, 2017
5
September, 2017
4
March, 2019
4
March, 2020
3
January, 2018
3
September, 2020
1
November, 2020
Available data
51
bed narrowPeak
39
zippedFastqFolder
31
bam
25
bigWig
18
fastq
Organism
111
Homo sapiens
Biosample type
52
primary cell
38
tissue
16
cell line
5
in vitro differentiated cells
Organ
73
pancreas
55
epithelium
20
liver
Project
72
AMP
39
HPAP
Genome assembly (visualization)
56
hg19
13
GRCh38
Lab
39
Klaus Kaestner, Upenn
29
AMP-T2D consortium
23
Kyle Gaulton, UCSD
20
Karen Mohlke, UNC
Audit category:
16
inconsistent ontology term
BIOSAMPLE
ASSAY
111 results
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ATAC-seq
primary cell
pancreatic alpha cell
22
monocyte
13
pancreatic beta cell
13
pancreatic acinar cell
4
tissue
liver
20
islet of Langerhans
18
cell line
EndoC_BH1
16
in vitro differentiated cells
embryonic stem cell
5
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