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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
77
ATAC-seq
22
snATAC-seq
9
DNase-seq
1
FAIRE-seq
Assay category
109
DNA accessibility
70
DNA binding
61
Transcription
48
DNA methylation
Date released
187
June, 2019
105
February, 2023
100
May, 2020
99
May, 2022
82
August, 2021
49
February, 2021
34
May, 2021
33
October, 2019
26
November, 2019
16
January, 2021
14
September, 2018
11
August, 2017
11
May, 2023
10
April, 2020
10
November, 2018
8
July, 2019
8
October, 2017
7
August, 2020
5
September, 2017
4
March, 2019
4
March, 2020
3
January, 2018
3
September, 2020
2
November, 2020
1
August, 2022
Available data
60
zippedFastqFolder
48
bed narrowPeak
30
bigWig
28
bam
28
fastq
10
bed bed3+
10
bigBed narrowPeak
9
bed broadPeak
9
bigBed broadPeak
1
txt
Organism
109
Homo sapiens
Biosample type
60
primary cell
49
tissue
Organ
60
pancreas
39
epithelium
23
liver
2
brain
1
adipose tissue
1
connective tissue
1
musculature of body
1
spleen
Project
60
HPAP
49
AMP
Genome assembly (visualization)
49
hg19
9
GRCh38
Lab
60
Klaus Kaestner, Upenn
20
Karen Mohlke, UNC
18
Kyle Gaulton, UCSD
11
AMP-T2D consortium
Audit category:
1
audit script error
BIOSAMPLE
ASSAY
109 results
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ATAC-seq
snATAC-seq
DNase-seq
FAIRE-seq
primary cell
pancreatic alpha cell
22
Langerhans cell
21
pancreatic beta cell
13
pancreatic acinar cell
4
tissue
liver
20
2
islet of Langerhans
18
body of pancreas
2
brain
2
omental fat pad
1
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