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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
103
ATAC-seq
46
total RNA-seq
41
WGBS
34
single cell RNA-seq
22
snATAC-seq
13
ChIP-seq
2
Hi-C
Assay category
103
DNA accessibility
Date released
103
February, 2023
100
May, 2020
77
May, 2022
76
August, 2021
34
May, 2021
26
November, 2019
22
February, 2021
22
October, 2019
14
September, 2018
11
May, 2023
8
October, 2017
7
August, 2020
6
July, 2019
5
August, 2017
5
September, 2017
4
March, 2019
4
March, 2020
3
January, 2018
3
September, 2020
1
November, 2020
Available data
64
bed narrowPeak
44
bam
39
zippedFastqFolder
20
bigWig
18
fastq
Organism
103
Homo sapiens
Biosample type
58
tissue
39
primary cell
5
in vitro differentiated cells
1
cell line
Organ
77
pancreas
40
epithelium
20
liver
1
adipose tissue
1
connective tissue
Project
64
AMP
39
HPAP
Genome assembly (visualization)
64
hg19
26
GRCh38
Lab
39
Klaus Kaestner, Upenn
26
AMP-T2D consortium
20
Karen Mohlke, UNC
18
Kyle Gaulton, UCSD
Audit category:
7
inconsistent ontology term
BIOSAMPLE
ASSAY
103 results
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Clear Filters
ATAC-seq
tissue
islet of Langerhans
37
liver
20
adipose tissue(adipose white tissue)
1
primary cell
pancreatic alpha cell
22
pancreatic beta cell
13
pancreatic acinar cell
4
in vitro differentiated cells
Pancreatic progenitors (progenitor cell of endocrine pancreas)
5
cell line
EndoC_BH1
1
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