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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
57
ATAC-seq
51
ChIP-seq
41
WGBS
8
total RNA-seq
Assay category
57
DNA accessibility
51
DNA binding
41
DNA methylation
8
Transcription
Target of assay
30
histone
30
histone modification
19
broad histone mark
11
control
11
narrow histone mark
10
transcription factor
6
RNA binding protein
Date released
188
August, 2017
157
July, 2018
104
May, 2022
72
September, 2018
61
May, 2021
56
February, 2023
55
November, 2019
53
October, 2018
39
April, 2018
32
February, 2021
19
September, 2020
18
October, 2019
14
March, 2020
11
September, 2017
10
November, 2020
8
January, 2021
7
August, 2020
7
November, 2018
6
July, 2019
5
March, 2019
5
October, 2017
4
August, 2021
4
June, 2019
3
August, 2018
3
October, 2022
2
May, 2019
1
August, 2022
1
February, 2020
1
June, 2018
Available data
80
zippedFastqFolder
77
bam
61
fastq
58
bed narrowPeak
42
bigWig
40
bigBed narrowPeak
6
txt
2
tsv
Organism
157
Homo sapiens
Biosample type
82
primary cell
75
tissue
Organ
157
pancreas
82
epithelium
40
liver
23
adipose tissue
23
connective tissue
2
musculature of body
Project
80
HPAP
77
AMP
Genome assembly (visualization)
60
hg19
42
GRCh38
Lab
80
Klaus Kaestner, Upenn
53
AMP-T2D consortium
24
Kyle Gaulton, UCSD
Audit category:
1
inconsistent control read length
BIOSAMPLE
ASSAY
157 results
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Clear Filters
ATAC-seq
ChIP-seq
WGBS
total RNA-seq
primary cell
pancreatic alpha cell
22
25
pancreatic beta cell
13
16
pancreatic acinar cell
4
2
tissue
body of pancreas
33
islet of Langerhans
18
6
endocrine pancreas
16
pancreas
2
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