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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
37
single cell RNA-seq
22
snATAC-seq
20
ATAC-seq
20
total RNA-seq
1
RNA microarray
Assay category
57
Transcription
42
DNA accessibility
Date released
683
February, 2021
400
November, 2017
341
May, 2020
336
May, 2021
311
August, 2021
261
October, 2019
223
August, 2017
194
June, 2019
135
February, 2023
113
May, 2019
96
May, 2022
89
July, 2019
81
November, 2018
80
April, 2019
75
December, 2017
49
March, 2020
47
September, 2023
40
May, 2024
40
September, 2020
39
February, 2018
35
December, 2018
30
January, 2019
24
February, 2020
23
October, 2018
19
April, 2020
18
October, 2017
15
May, 2023
9
July, 2018
8
April, 2018
8
January, 2018
8
January, 2021
6
November, 2019
6
November, 2020
5
March, 2023
4
December, 2019
2
June, 2018
1
August, 2018
1
October, 2022
1
September, 2018
Available data
54
zippedFastqFolder
20
bed narrowPeak
20
bigWig
3
tsv
1
bed bed3+
1
txt
Organism
100
Homo sapiens
Biosample type
54
primary cell
44
tissue
2
in vitro differentiated cells
Organ
pancreas
epithelium
45
liver
3
kidney
2
musculature of body
Project
54
HPAP
46
AMP
Genome assembly (visualization)
21
hg19
Lab
54
Klaus Kaestner, Upenn
40
Karen Mohlke, UNC
6
AMP-T2D consortium
Audit category:
4
audit script error
2
inconsistent ontology term
organ_slims!
epithelium
pancreas
BIOSAMPLE
ASSAY
100 results
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Clear Filters
single cell RNA-seq
snATAC-seq
ATAC-seq
total RNA-seq
RNA microarray
primary cell
Langerhans cell
33
21
tissue
liver
20
20
skeletal muscle tissue
1
1
kidney
1
kidney interstitium
1
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
2
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