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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
74
ChIP-seq
11
ATAC-seq
3
single cell RNA-seq
1
total RNA-seq
Assay category
74
DNA binding
11
DNA accessibility
4
Transcription
Target of assay
30
histone
30
histone modification
29
control
19
broad histone mark
15
transcription factor
11
RNA binding protein
11
narrow histone mark
Date released
683
February, 2021
400
November, 2017
382
August, 2017
373
May, 2021
341
May, 2020
313
August, 2021
279
October, 2019
198
June, 2019
153
February, 2023
135
July, 2018
120
May, 2022
115
May, 2019
95
July, 2019
88
November, 2018
80
April, 2019
75
December, 2017
74
October, 2018
58
March, 2020
47
September, 2023
45
November, 2019
40
May, 2024
40
September, 2020
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
16
April, 2018
16
January, 2021
15
May, 2023
12
September, 2018
10
November, 2020
8
January, 2018
6
September, 2017
5
March, 2019
5
March, 2023
4
December, 2019
2
June, 2018
1
August, 2018
1
August, 2022
1
October, 2022
Available data
74
bam
58
fastq
45
bed narrowPeak
45
bigBed narrowPeak
45
bigWig
Organism
89
Homo sapiens
Biosample type
89
tissue
Organ
53
pancreas
24
adipose tissue
24
connective tissue
14
kidney
epithelium
Project
89
AMP
Genome assembly (visualization)
57
GRCh38
46
hg19
Lab
75
AMP-T2D consortium
14
Katalin Susztak, Upenn
Audit category:
1
inconsistent control read length
organ_slims!
epithelium
BIOSAMPLE
ASSAY
89 results
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Clear Filters
ChIP-seq
ATAC-seq
single cell RNA-seq
total RNA-seq
tissue
body of pancreas
33
endocrine pancreas
16
kidney
11
3
subcutaneous adipose tissue
12
omental fat pad
11
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