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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
130
ChIP-seq
55
total RNA-seq
16
pCHi-C
13
ATAC-seq
1
DNAme array
Assay category
130
DNA binding
55
Transcription
13
DNA accessibility
1
DNA methylation
Target of assay
121
histone
121
histone modification
66
broad histone mark
55
narrow histone mark
6
control
3
RNA binding protein
3
transcription factor
Date released
206
May, 2021
147
May, 2020
134
May, 2022
88
February, 2023
73
September, 2018
59
August, 2017
59
September, 2020
55
June, 2019
48
February, 2021
48
July, 2018
43
April, 2018
34
October, 2019
31
July, 2019
9
November, 2017
8
January, 2021
7
August, 2020
6
November, 2020
5
December, 2019
5
May, 2019
5
September, 2017
4
August, 2021
3
August, 2018
3
June, 2018
3
October, 2022
2
October, 2018
1
March, 2020
1
March, 2023
1
November, 2018
Available data
180
bigWig
158
bam
133
bed narrowPeak
84
tagAlign
52
tsv
9
fastq
6
bed broadPeak
6
bigBed broadPeak
6
bigBed narrowPeak
2
bed bed3+
Organism
215
Homo sapiens
Biosample type
336
cell line
215
primary cell
132
in vitro differentiated cells
122
tissue
Organ
9
brain
6
epithelium
6
vasculature
3
blood vessel
1
bone element
1
bone marrow
1
connective tissue
Project
151
T1D
64
AMP
Genome assembly (visualization)
193
hg19
155
GRCh38
Lab
186
Kyle Gaulton, UCSD
29
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
BIOSAMPLE
ASSAY
215 results
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Clear Filters
ChIP-seq
total RNA-seq
pCHi-C
ATAC-seq
DNAme array
primary cell
monocyte
85
52
1
13
1
CD8-positive, alpha-beta T cell
33
2
1
astrocyte of the cerebellum
3
brain microvascular endothelial cell
3
choroid plexus epithelial cell
3
naive thymus-derived CD4-positive, alpha-beta T cell
2
1
CD4-positive, alpha-beta T cell
2
neutrophil
1
1
B cell
1
activated CD4-positive, alpha-beta T cell
1
adult endothelial progenitor cell
1
alternatively activated macrophage
1
embryonic stem cell
1
erythroblast
1
inflammatory macrophage
1
macrophage
1
megakaryocyte
1
naive B cel
1
naive thymus-derived CD8-positive, alpha-beta T cell
1
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