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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
375
ChIP-seq
1
WGBS
Assay category
375
DNA binding
1
DNA methylation
Target of assay
298
transcription factor
82
recombinant protein
59
control
55
RNA binding protein
22
chromatin remodeller
15
histone
15
histone modification
8
broad histone mark
7
narrow histone mark
2
other context
2
other post-translational modification
Date released
315
November, 2017
96
February, 2021
61
November, 2018
44
August, 2021
30
October, 2019
28
December, 2018
23
January, 2019
21
May, 2021
16
November, 2019
11
March, 2020
6
February, 2023
6
November, 2020
2
March, 2023
1
January, 2018
1
May, 2020
1
October, 2022
Available data
376
fastq
375
bam
325
bigWig
305
bed narrowPeak
305
bigBed narrowPeak
58
bed broadPeak
58
bigBed broadPeak
12
tagAlign
3
tar
1
bed bedMethyl
1
bigBed bedMethyl
Organism
376
Homo sapiens
Biosample type
376
cell line
108
tissue
10
primary cell
Organ
361
liver
15
blood
15
bodily fluid
Project
376
AMP
Genome assembly (visualization)
320
hg19
274
GRCh38
Lab
376
AMP-T2D consortium
Audit category:
13
missing controlled_by
Audit category:
26
inconsistent control read length
8
inconsistent control run_type
BIOSAMPLE
ASSAY
376 results
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ChIP-seq
WGBS
cell line
HepG2
360
1
GM12878
15
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