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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
12
ChIP-seq
1
ATAC-seq
1
Hi-C
1
total RNA-seq
Assay category
12
DNA binding
1
3D chromatin structure
1
DNA accessibility
1
Transcription
Target of assay
10
histone
10
histone modification
6
broad histone mark
4
narrow histone mark
2
control
RNA binding protein
1
transcription factor
Date released
281
November, 2017
96
February, 2021
43
August, 2021
40
November, 2018
30
October, 2019
26
December, 2018
21
May, 2021
17
January, 2019
15
November, 2019
11
March, 2020
6
February, 2023
6
November, 2020
2
March, 2023
1
January, 2018
1
May, 2020
1
October, 2022
Available data
14
bam
11
bed narrowPeak
11
bigWig
1
bedpe bed3+
1
hic
1
tsv
Organism
15
Homo sapiens
Biosample type
40
tissue
15
cell line
5
in vitro differentiated cells
Organ
15
epithelium
15
pancreas
Project
15
AMP
Genome assembly (visualization)
13
hg19
12
GRCh38
Lab
15
AMP-T2D consortium
Audit category:
15
inconsistent ontology term
target.investigated_as!
RNA binding protein
BIOSAMPLE
ASSAY
15 results
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ChIP-seq
ATAC-seq
Hi-C
total RNA-seq
cell line
EndoC_BH1
12
1
1
1
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