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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
396
ChIP-seq
Assay category
396
DNA binding
Target of assay
235
transcription factor
87
histone
87
histone modification
71
control
66
recombinant protein
50
broad histone mark
37
narrow histone mark
35
RNA binding protein
11
chromatin remodeller
2
other context
2
other post-translational modification
Date released
396
November, 2017
257
August, 2017
242
October, 2019
165
May, 2021
120
May, 2019
93
December, 2017
80
April, 2019
74
October, 2018
67
November, 2018
50
May, 2020
43
August, 2021
34
December, 2018
31
June, 2019
25
January, 2019
24
February, 2018
13
November, 2019
11
October, 2017
8
February, 2021
6
September, 2017
3
March, 2020
Available data
382
bam
324
bigWig
314
fastq
303
bed narrowPeak
302
bigBed narrowPeak
78
tagAlign
70
bed broadPeak
64
bigBed broadPeak
3
tar
Organism
396
Homo sapiens
Biosample type
305
cell line
82
tissue
9
primary cell
Organ
305
liver
91
brain
6
epithelium
6
vasculature
3
blood vessel
Project
396
AMP
Genome assembly (visualization)
277
GRCh38
271
hg19
Lab
396
AMP-T2D consortium
Audit category:
missing controlled_by
Audit category:
18
inconsistent control read length
audit.NOT_COMPLIANT.category!
missing controlled_by
BIOSAMPLE
ASSAY
396 results
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Clear Filters
ChIP-seq
cell line
HepG2
305
tissue
layer of hippocampus
22
caudate nucleus
15
substantia nigra
15
cingulate gyrus
14
middle frontal area 46
14
+ See 1 more…
primary cell
astrocyte of the cerebellum
3
brain microvascular endothelial cell
3
choroid plexus epithelial cell
3
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