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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
211
ChIP-seq
3
single cell RNA-seq
Assay category
211
DNA binding
3
Transcription
Target of assay
191
transcription factor
65
recombinant protein
27
RNA binding protein
16
control
11
chromatin remodeller
1
histone
1
histone modification
1
narrow histone mark
1
other context
1
other post-translational modification
Date released
574
February, 2021
316
May, 2021
260
May, 2020
235
August, 2017
211
November, 2017
208
October, 2019
164
July, 2018
97
May, 2019
91
July, 2019
77
December, 2017
72
September, 2018
65
April, 2019
62
November, 2018
60
August, 2021
59
November, 2019
49
April, 2018
47
October, 2018
45
February, 2023
39
May, 2022
32
March, 2020
31
February, 2018
30
December, 2018
26
January, 2019
23
June, 2019
9
October, 2017
7
September, 2017
5
December, 2019
5
November, 2020
3
August, 2018
3
January, 2018
3
June, 2018
3
March, 2019
3
October, 2022
1
May, 2023
Available data
284
bigWig
283
bam
278
fastq
259
bed narrowPeak
258
bigBed narrowPeak
bed broadPeak
64
bigBed broadPeak
18
tagAlign
3
tar
3
tsv
Organism
214
Homo sapiens
Biosample type
208
cell line
6
primary cell
Organ
208
liver
5
epithelium
3
brain
3
pancreas
2
vasculature
1
blood vessel
Project
214
AMP
Genome assembly (visualization)
228
GRCh38
214
hg19
Lab
214
AMP-T2D consortium
Audit category:
10
missing controlled_by
Audit category:
8
inconsistent control read length
4
inconsistent control run_type
files.file_type!
bed broadPeak
BIOSAMPLE
ASSAY
214 results
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Clear Filters
ChIP-seq
single cell RNA-seq
cell line
HepG2
208
primary cell
pancreatic alpha cell
2
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
pancreatic acinar cell
1
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