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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
304
ChIP-seq
164
DNase-seq
Assay category
304
DNA binding
164
DNA accessibility
Target of assay
242
transcription factor
65
recombinant protein
43
histone
43
histone modification
38
RNA binding protein
25
narrow histone mark
18
broad histone mark
16
control
15
chromatin remodeller
2
other context
2
other post-translational modification
Date released
574
February, 2021
316
May, 2021
281
November, 2017
276
August, 2017
260
May, 2020
217
October, 2019
187
June, 2019
164
July, 2018
97
May, 2019
91
July, 2019
77
December, 2017
72
September, 2018
71
November, 2018
65
April, 2019
60
August, 2021
59
November, 2019
49
April, 2018
47
October, 2018
45
February, 2023
39
May, 2022
32
March, 2020
31
February, 2018
30
December, 2018
26
January, 2019
13
October, 2017
7
September, 2017
6
November, 2020
5
December, 2019
3
August, 2018
3
January, 2018
3
June, 2018
3
March, 2019
3
October, 2022
1
May, 2023
Available data
468
bigWig
467
bam
446
bed narrowPeak
445
bigBed narrowPeak
275
fastq
234
bed broadPeak
228
bigBed broadPeak
164
bed bed3+
18
tagAlign
3
tar
Organism
468
Homo sapiens
Biosample type
266
cell line
153
tissue
49
primary cell
Organ
268
liver
73
kidney
41
musculature of body
35
brain
32
limb
30
heart
18
epithelium
18
ureter
14
connective tissue
12
vasculature
7
blood vessel
6
eye
2
artery
2
pancreas
1
adipose tissue
Project
468
AMP
Genome assembly (visualization)
490
GRCh38
468
hg19
Lab
468
AMP-T2D consortium
Audit category:
22
inconsistent ontology term
Audit category:
10
missing controlled_by
Audit category:
21
inconsistent control read length
4
inconsistent control run_type
BIOSAMPLE
ASSAY
468 results
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Clear Filters
ChIP-seq
DNase-seq
cell line
HepG2
266
tissue
muscle of arm
17
heart
16
kidney
13
muscle of leg
13
brain
12
+ See 26 more…
primary cell
skeletal muscle satellite cell
7
mesenchymal stem cell
6
cardiac fibroblast
3
2
astrocyte of the cerebellum
3
1
brain microvascular endothelial cell
3
1
+ See 13 more…
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