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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
75
ChIP-seq
26
total RNA-seq
14
ATAC-seq
Assay category
75
DNA binding
26
Transcription
14
DNA accessibility
Target of assay
transcription factor
65
recombinant protein
56
histone
56
histone modification
34
RNA binding protein
29
narrow histone mark
27
broad histone mark
16
control
15
chromatin remodeller
2
other context
2
other post-translational modification
Date released
569
February, 2021
312
May, 2021
260
May, 2020
229
August, 2017
210
October, 2019
183
June, 2019
164
July, 2018
92
May, 2019
91
July, 2019
72
September, 2018
60
April, 2019
58
November, 2019
49
April, 2018
49
August, 2021
45
February, 2023
43
November, 2017
39
May, 2022
35
December, 2017
32
March, 2020
32
October, 2018
31
February, 2018
13
October, 2017
12
January, 2019
10
November, 2018
7
September, 2017
6
November, 2020
5
December, 2019
3
August, 2018
3
January, 2018
3
June, 2018
3
March, 2019
3
October, 2022
2
December, 2018
1
May, 2023
Available data
115
bigWig
114
bam
109
fastq
71
bed narrowPeak
38
bigBed narrowPeak
26
tsv
23
bed broadPeak
18
tagAlign
17
bigBed broadPeak
Organism
115
Homo sapiens
Biosample type
78
primary cell
31
cell line
6
tissue
Organ
72
pancreas
65
epithelium
31
liver
12
brain
4
vasculature
2
blood vessel
Project
115
AMP
Genome assembly (visualization)
148
GRCh38
115
hg19
Lab
115
AMP-T2D consortium
Audit category:
33
missing controlled_by
Audit category:
11
inconsistent control read length
target.investigated_as!
transcription factor
BIOSAMPLE
ASSAY
115 results
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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
primary cell
pancreatic ductal cell
13
4
4
pancreatic beta cell
10
4
pancreatic acinar cell
8
2
3
pancreatic alpha cell
10
3
pancreatic endocrine cell
11
+ See 3 more…
cell line
HepG2
31
tissue
cingulate gyrus
2
middle frontal area 46
2
caudate nucleus
1
substantia nigra
1
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