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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
115
ChIP-seq
Assay category
115
DNA binding
Target of assay
94
control
13
histone
13
histone modification
9
narrow histone mark
8
transcription factor
4
broad histone mark
2
RNA binding protein
Date released
715
February, 2021
399
May, 2021
359
August, 2017
341
May, 2020
319
August, 2021
244
October, 2019
205
February, 2023
200
May, 2022
168
July, 2018
106
July, 2019
92
November, 2017
64
March, 2020
61
November, 2019
59
September, 2018
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
37
February, 2018
33
December, 2017
31
October, 2018
25
February, 2020
23
May, 2019
19
April, 2020
17
October, 2017
16
April, 2019
16
January, 2021
15
May, 2023
15
November, 2018
15
November, 2020
10
December, 2019
9
January, 2019
8
January, 2018
8
June, 2019
7
August, 2020
6
September, 2017
5
December, 2018
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
491
bam
410
bigWig
391
bed narrowPeak
bigBed narrowPeak
303
fastq
67
tagAlign
57
bed broadPeak
51
bigBed broadPeak
3
tar
Organism
115
Homo sapiens
Biosample type
64
cell line
47
tissue
4
primary cell
Organ
64
liver
31
brain
13
vasculature
12
blood vessel
6
heart
3
epithelium
2
artery
1
kidney
1
limb
1
musculature of body
1
pancreas
Project
115
AMP
Genome assembly (visualization)
21
hg19
Lab
115
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
Audit category:
inconsistent control read length
audit.WARNING.category!
inconsistent control read length
files.file_type!
bigBed narrowPeak
BIOSAMPLE
ASSAY
115 results
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Clear Filters
ChIP-seq
cell line
HepG2
64
tissue
cingulate gyrus
8
layer of hippocampus
6
substantia nigra
4
thoracic aorta
4
ascending aorta
3
+ See 12 more…
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
kidney epithelial cell
1
See all biosamples
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