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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
314
ChIP-seq
Assay category
314
DNA binding
Target of assay
230
transcription factor
65
histone
65
histone modification
65
recombinant protein
40
broad histone mark
30
RNA binding protein
25
narrow histone mark
16
control
9
chromatin remodeller
2
other context
2
other post-translational modification
Date released
568
February, 2021
316
May, 2021
314
November, 2017
260
May, 2020
256
August, 2017
211
October, 2019
210
June, 2019
164
July, 2018
121
August, 2021
97
May, 2019
85
July, 2019
75
November, 2018
72
September, 2018
66
February, 2023
65
April, 2019
61
December, 2017
57
November, 2019
49
April, 2018
46
October, 2018
40
May, 2024
38
May, 2022
30
December, 2018
29
February, 2018
26
January, 2019
20
March, 2020
14
October, 2017
8
January, 2018
7
August, 2020
6
November, 2020
5
December, 2019
5
September, 2017
3
August, 2018
3
June, 2018
3
September, 2020
Available data
371
bam
313
bigWig
303
fastq
294
bed narrowPeak
293
bigBed narrowPeak
67
tagAlign
57
bed broadPeak
51
bigBed broadPeak
3
tar
Organism
314
Homo sapiens
Biosample type
247
cell line
58
tissue
9
primary cell
Organ
247
liver
67
brain
6
epithelium
6
vasculature
3
blood vessel
Project
314
AMP
Genome assembly (visualization)
263
GRCh38
260
hg19
Lab
314
AMP-T2D consortium
Audit category:
7
missing controlled_by
Audit category:
inconsistent control read length
4
inconsistent control run_type
audit.WARNING.category!
inconsistent control read length
BIOSAMPLE
ASSAY
314 results
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Clear Filters
ChIP-seq
cell line
HepG2
247
tissue
layer of hippocampus
16
caudate nucleus
12
middle frontal area 46
11
substantia nigra
11
cingulate gyrus
7
+ See 1 more…
primary cell
astrocyte of the cerebellum
3
brain microvascular endothelial cell
3
choroid plexus epithelial cell
3
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