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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
260
ChIP-seq
Assay category
260
DNA binding
Target of assay
228
transcription factor
64
recombinant protein
29
RNA binding protein
16
control
13
histone
13
histone modification
9
chromatin remodeller
9
narrow histone mark
4
broad histone mark
2
other context
2
other post-translational modification
Date released
574
February, 2021
316
May, 2021
260
August, 2017
260
May, 2020
260
November, 2017
217
October, 2019
187
June, 2019
164
July, 2018
97
May, 2019
91
July, 2019
72
September, 2018
66
December, 2017
66
November, 2018
65
April, 2019
60
August, 2021
59
November, 2019
49
April, 2018
46
October, 2018
45
February, 2023
39
May, 2022
32
March, 2020
30
December, 2018
29
February, 2018
26
January, 2019
13
October, 2017
7
September, 2017
6
November, 2020
5
December, 2019
3
August, 2018
3
January, 2018
3
June, 2018
3
March, 2019
3
October, 2022
1
May, 2023
Available data
260
bigWig
259
bam
254
fastq
240
bed narrowPeak
239
bigBed narrowPeak
57
bed broadPeak
51
bigBed broadPeak
7
tagAlign
3
tar
Organism
260
Homo sapiens
Biosample type
245
cell line
9
primary cell
6
tissue
Organ
245
liver
15
brain
6
epithelium
6
vasculature
3
blood vessel
Project
260
AMP
Genome assembly (visualization)
263
GRCh38
260
hg19
Lab
260
AMP-T2D consortium
Audit category:
7
missing controlled_by
Audit category:
inconsistent control read length
4
inconsistent control run_type
audit.WARNING.category!
inconsistent control read length
month_released!
August, 2020
BIOSAMPLE
ASSAY
260 results
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Clear Filters
ChIP-seq
cell line
HepG2
245
primary cell
astrocyte of the cerebellum
3
brain microvascular endothelial cell
3
choroid plexus epithelial cell
3
tissue
cingulate gyrus
2
middle frontal area 46
2
caudate nucleus
1
substantia nigra
1
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