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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
357
ChIP-seq
Assay category
357
DNA binding
Target of assay
231
transcription factor
123
histone
123
histone modification
77
broad histone mark
65
recombinant protein
46
narrow histone mark
33
RNA binding protein
9
chromatin remodeller
2
other context
2
other post-translational modification
Date released
293
November, 2017
210
June, 2019
97
May, 2019
70
October, 2019
68
November, 2018
64
April, 2019
50
December, 2017
44
October, 2018
36
August, 2017
30
December, 2018
21
January, 2019
14
September, 2018
6
October, 2017
5
September, 2017
2
July, 2019
1
November, 2020
Available data
450
bam
378
bigWig
359
bed narrowPeak
357
bigBed narrowPeak
303
fastq
67
tagAlign
57
bed broadPeak
51
bigBed broadPeak
3
tar
Organism
357
Homo sapiens
Biosample type
230
cell line
121
tissue
6
primary cell
Organ
230
liver
63
brain
46
heart
18
kidney
4
epithelium
4
vasculature
2
blood vessel
Project
357
AMP
Genome assembly (visualization)
327
GRCh38
303
hg19
Lab
357
AMP-T2D consortium
Audit category:
7
missing controlled_by
Audit category:
inconsistent control read length
4
inconsistent control run_type
audit.WARNING.category!
inconsistent control read length
BIOSAMPLE
ASSAY
357 results
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ChIP-seq
cell line
HepG2
230
tissue
heart left ventricle
28
kidney
18
layer of hippocampus
16
caudate nucleus
12
heart right ventricle
11
+ See 5 more…
primary cell
astrocyte of the cerebellum
2
brain microvascular endothelial cell
2
choroid plexus epithelial cell
2
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