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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
496
ChIP-seq
187
DNase-seq
Assay category
496
DNA binding
187
DNA accessibility
Target of assay
244
transcription factor
156
histone
156
histone modification
93
control
89
broad histone mark
67
narrow histone mark
65
recombinant protein
40
RNA binding protein
9
chromatin remodeller
2
other context
2
other post-translational modification
Date released
715
February, 2021
399
May, 2021
395
August, 2017
385
November, 2017
341
May, 2020
319
August, 2021
314
October, 2019
218
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
120
May, 2019
108
July, 2019
83
December, 2017
83
November, 2018
80
April, 2019
75
October, 2018
73
September, 2018
64
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
37
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
668
bam
588
bigWig
569
bed narrowPeak
567
bigBed narrowPeak
303
fastq
244
bed broadPeak
238
bigBed broadPeak
187
bed bed3+
67
tagAlign
3
tar
Organism
683
Homo sapiens
Biosample type
325
tissue
294
cell line
64
primary cell
Organ
296
liver
121
brain
104
kidney
92
heart
43
musculature of body
32
limb
26
epithelium
18
connective tissue
18
ureter
13
vasculature
8
blood vessel
7
eye
4
pancreas
2
artery
1
adipose tissue
Project
683
AMP
Genome assembly (visualization)
537
GRCh38
512
hg19
Lab
683
AMP-T2D consortium
Audit category:
26
inconsistent ontology term
Audit category:
7
missing controlled_by
Audit category:
inconsistent control read length
4
inconsistent control run_type
audit.WARNING.category!
inconsistent control read length
BIOSAMPLE
ASSAY
683 results
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Clear Filters
ChIP-seq
DNase-seq
tissue
heart left ventricle
35
3
kidney
23
13
heart
9
18
layer of hippocampus
22
muscle of arm
17
+ See 38 more…
cell line
HepG2
294
primary cell
cardiac fibroblast
5
3
skeletal muscle satellite cell
8
mesenchymal stem cell
7
astrocyte of the cerebellum
3
1
brain microvascular endothelial cell
3
1
+ See 17 more…
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