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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
408
ChIP-seq
Assay category
408
DNA binding
Target of assay
235
transcription factor
95
histone
95
histone modification
75
control
65
recombinant protein
54
broad histone mark
41
narrow histone mark
33
RNA binding protein
9
chromatin remodeller
2
other context
2
other post-translational modification
Date released
649
February, 2021
396
May, 2021
395
August, 2017
385
November, 2017
341
May, 2020
306
October, 2019
227
August, 2021
200
May, 2022
183
June, 2019
169
February, 2023
168
July, 2018
99
May, 2019
83
December, 2017
83
July, 2019
83
November, 2018
75
October, 2018
73
September, 2018
61
November, 2019
59
September, 2020
57
March, 2020
49
April, 2018
47
September, 2023
37
February, 2018
35
December, 2018
30
January, 2019
23
April, 2019
23
October, 2017
22
February, 2020
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
394
bam
331
bigWig
312
bed narrowPeak
311
bigBed narrowPeak
303
fastq
67
tagAlign
57
bed broadPeak
51
bigBed broadPeak
3
tar
Organism
408
Homo sapiens
Biosample type
294
cell line
105
tissue
9
primary cell
Organ
294
liver
91
brain
heart
23
kidney
6
epithelium
6
vasculature
3
blood vessel
Project
408
AMP
Genome assembly (visualization)
281
GRCh38
278
hg19
Lab
408
AMP-T2D consortium
Audit category:
7
missing controlled_by
Audit category:
inconsistent control read length
4
inconsistent control run_type
audit.WARNING.category!
inconsistent control read length
organ_slims!
heart
BIOSAMPLE
ASSAY
408 results
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Clear Filters
ChIP-seq
cell line
HepG2
294
tissue
kidney
23
layer of hippocampus
22
caudate nucleus
15
substantia nigra
15
cingulate gyrus
14
+ See 2 more…
primary cell
astrocyte of the cerebellum
3
brain microvascular endothelial cell
3
choroid plexus epithelial cell
3
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