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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
313
ChIP-seq
20
ATAC-seq
Assay category
313
DNA binding
20
DNA accessibility
Target of assay
230
transcription factor
65
recombinant protein
64
histone
64
histone modification
39
broad histone mark
30
RNA binding protein
25
narrow histone mark
16
control
9
chromatin remodeller
2
other context
2
other post-translational modification
Date released
551
February, 2021
313
November, 2017
303
May, 2021
260
May, 2020
256
August, 2017
210
June, 2019
207
October, 2019
164
July, 2018
97
May, 2019
85
July, 2019
75
November, 2018
72
September, 2018
65
April, 2019
61
December, 2017
49
April, 2018
47
August, 2021
46
October, 2018
40
May, 2024
31
November, 2019
30
December, 2018
29
February, 2018
26
January, 2019
20
March, 2020
20
May, 2022
14
October, 2017
8
January, 2018
7
August, 2020
5
December, 2019
5
November, 2020
5
September, 2017
3
August, 2018
3
February, 2023
3
June, 2018
3
September, 2020
Available data
395
bam
333
bigWig
332
bed narrowPeak
327
fastq
293
bigBed narrowPeak
134
zippedFastqFolder
67
tagAlign
57
bed broadPeak
51
bigBed broadPeak
7
txt
3
tar
1
bed bed3+
Organism
333
Homo sapiens
Biosample type
247
cell line
77
tissue
9
primary cell
Organ
267
liver
66
brain
6
epithelium
6
vasculature
3
blood vessel
Project
333
AMP
Genome assembly (visualization)
280
hg19
262
GRCh38
Lab
313
AMP-T2D consortium
20
Karen Mohlke, UNC
Audit category:
7
missing controlled_by
Audit category:
inconsistent control read length
4
inconsistent control run_type
audit.WARNING.category!
inconsistent control read length
BIOSAMPLE
ASSAY
333 results
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Clear Filters
ChIP-seq
ATAC-seq
cell line
HepG2
247
tissue
liver
20
layer of hippocampus
16
caudate nucleus
12
middle frontal area 46
11
substantia nigra
11
+ See 2 more…
primary cell
astrocyte of the cerebellum
3
brain microvascular endothelial cell
3
choroid plexus epithelial cell
3
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