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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
379
ChIP-seq
Assay category
379
DNA binding
Target of assay
232
transcription factor
75
histone
75
histone modification
69
control
65
recombinant protein
44
broad histone mark
31
narrow histone mark
30
RNA binding protein
9
chromatin remodeller
2
other context
2
other post-translational modification
Date released
649
February, 2021
399
May, 2021
395
August, 2017
379
November, 2017
341
May, 2020
313
August, 2021
267
October, 2019
211
June, 2019
200
May, 2022
170
February, 2023
168
July, 2018
96
July, 2019
83
December, 2017
83
November, 2018
80
April, 2019
75
October, 2018
73
September, 2018
70
May, 2019
61
November, 2019
60
March, 2020
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
37
February, 2018
35
December, 2018
30
January, 2019
23
October, 2017
22
February, 2020
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
365
bam
307
bigWig
297
fastq
290
bed narrowPeak
289
bigBed narrowPeak
67
tagAlign
53
bed broadPeak
47
bigBed broadPeak
3
tar
Organism
379
Homo sapiens
Biosample type
294
cell line
82
tissue
3
primary cell
Organ
294
liver
91
brain
6
epithelium
vasculature
3
blood vessel
Project
379
AMP
Genome assembly (visualization)
259
GRCh38
254
hg19
Lab
379
AMP-T2D consortium
Audit category:
7
missing controlled_by
Audit category:
inconsistent control read length
4
inconsistent control run_type
audit.WARNING.category!
inconsistent control read length
organ_slims!
vasculature
BIOSAMPLE
ASSAY
379 results
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Clear Filters
ChIP-seq
cell line
HepG2
294
tissue
layer of hippocampus
22
caudate nucleus
15
substantia nigra
15
cingulate gyrus
14
middle frontal area 46
14
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primary cell
astrocyte of the cerebellum
3
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