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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
341
ChIP-seq
Assay category
341
DNA binding
Target of assay
234
transcription factor
77
histone
77
histone modification
71
control
65
recombinant protein
broad histone mark
33
narrow histone mark
32
RNA binding protein
9
chromatin remodeller
2
other context
2
other post-translational modification
Date released
715
February, 2021
341
May, 2020
341
November, 2017
323
May, 2021
310
August, 2021
289
August, 2017
259
October, 2019
210
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
108
July, 2019
83
November, 2018
73
December, 2017
64
March, 2020
62
May, 2019
59
September, 2020
56
October, 2018
56
September, 2018
55
November, 2019
49
April, 2018
47
September, 2023
43
April, 2019
35
December, 2018
30
February, 2018
26
January, 2019
25
February, 2020
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
13
October, 2017
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
331
bam
301
fastq
274
bigWig
254
bed narrowPeak
253
bigBed narrowPeak
53
bed broadPeak
49
bigBed broadPeak
32
tagAlign
3
tar
Organism
341
Homo sapiens
Biosample type
292
cell line
40
tissue
9
primary cell
Organ
292
liver
49
brain
6
epithelium
6
vasculature
3
blood vessel
Project
341
AMP
Genome assembly (visualization)
256
hg19
223
GRCh38
Lab
341
AMP-T2D consortium
Audit category:
7
missing controlled_by
Audit category:
inconsistent control read length
4
inconsistent control run_type
audit.WARNING.category!
inconsistent control read length
target.investigated_as!
broad histone mark
BIOSAMPLE
ASSAY
341 results
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Clear Filters
ChIP-seq
cell line
HepG2
292
tissue
layer of hippocampus
10
caudate nucleus
7
cingulate gyrus
7
middle frontal area 46
7
substantia nigra
7
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primary cell
astrocyte of the cerebellum
3
brain microvascular endothelial cell
3
choroid plexus epithelial cell
3
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