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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
308
ChIP-seq
Assay category
308
DNA binding
Target of assay
232
transcription factor
73
histone
73
histone modification
66
recombinant protein
45
broad histone mark
33
RNA binding protein
28
narrow histone mark
11
chromatin remodeller
2
other context
2
other post-translational modification
Date released
308
November, 2017
210
June, 2019
97
May, 2019
70
October, 2019
69
November, 2018
64
April, 2019
50
December, 2017
45
October, 2018
41
August, 2017
30
December, 2018
21
January, 2019
14
September, 2018
6
October, 2017
5
September, 2017
2
July, 2019
1
November, 2020
Available data
388
bam
330
bigWig
320
fastq
309
bed narrowPeak
308
bigBed narrowPeak
78
tagAlign
70
bed broadPeak
64
bigBed broadPeak
3
tar
Organism
308
Homo sapiens
Biosample type
245
cell line
57
tissue
6
primary cell
Organ
245
liver
63
brain
4
epithelium
4
vasculature
2
blood vessel
Project
308
AMP
Genome assembly (visualization)
278
GRCh38
254
hg19
Lab
308
AMP-T2D consortium
Audit category:
6
missing controlled_by
Audit category:
19
inconsistent control read length
inconsistent control run_type
audit.WARNING.category!
inconsistent control run_type
BIOSAMPLE
ASSAY
308 results
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Clear Filters
ChIP-seq
cell line
HepG2
245
tissue
layer of hippocampus
16
caudate nucleus
12
middle frontal area 46
11
substantia nigra
11
cingulate gyrus
6
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primary cell
astrocyte of the cerebellum
2
brain microvascular endothelial cell
2
choroid plexus epithelial cell
2
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