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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
352
ChIP-seq
Assay category
352
DNA binding
Target of assay
240
transcription factor
88
histone
88
histone modification
71
control
66
recombinant protein
broad histone mark
38
narrow histone mark
35
RNA binding protein
11
chromatin remodeller
2
other context
2
other post-translational modification
Date released
715
February, 2021
352
November, 2017
341
May, 2020
323
May, 2021
310
August, 2021
301
August, 2017
259
October, 2019
210
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
108
July, 2019
84
November, 2018
79
December, 2017
64
March, 2020
62
May, 2019
59
September, 2020
57
October, 2018
56
September, 2018
55
November, 2019
49
April, 2018
47
September, 2023
43
April, 2019
35
December, 2018
31
February, 2018
26
January, 2019
25
February, 2020
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
13
October, 2017
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
342
bam
312
fastq
285
bigWig
264
bed narrowPeak
263
bigBed narrowPeak
60
bed broadPeak
56
bigBed broadPeak
37
tagAlign
3
tar
Organism
352
Homo sapiens
Biosample type
303
cell line
40
tissue
9
primary cell
Organ
303
liver
49
brain
6
epithelium
6
vasculature
3
blood vessel
Project
352
AMP
Genome assembly (visualization)
267
hg19
233
GRCh38
Lab
352
AMP-T2D consortium
Audit category:
6
missing controlled_by
Audit category:
15
inconsistent control read length
inconsistent control run_type
audit.WARNING.category!
inconsistent control run_type
target.investigated_as!
broad histone mark
BIOSAMPLE
ASSAY
352 results
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Clear Filters
ChIP-seq
cell line
HepG2
303
tissue
layer of hippocampus
10
caudate nucleus
7
cingulate gyrus
7
middle frontal area 46
7
substantia nigra
7
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primary cell
astrocyte of the cerebellum
3
brain microvascular endothelial cell
3
choroid plexus epithelial cell
3
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