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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
376
ChIP-seq
Assay category
376
DNA binding
Target of assay
231
transcription factor
74
histone
74
histone modification
68
control
65
recombinant protein
44
broad histone mark
30
narrow histone mark
29
RNA binding protein
9
chromatin remodeller
2
other context
2
other post-translational modification
Date released
667
February, 2021
376
November, 2017
341
August, 2017
315
August, 2021
280
October, 2019
194
May, 2020
193
May, 2021
163
June, 2019
120
July, 2018
117
February, 2023
115
May, 2019
83
December, 2017
82
November, 2018
80
April, 2019
77
July, 2019
73
October, 2018
66
May, 2022
63
March, 2020
61
November, 2019
47
September, 2023
37
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
15
May, 2023
10
November, 2020
8
January, 2018
8
January, 2021
6
April, 2018
6
September, 2017
5
December, 2019
5
March, 2019
4
March, 2023
1
August, 2018
1
August, 2022
1
October, 2022
Available data
362
bam
304
bigWig
294
fastq
288
bed narrowPeak
287
bigBed narrowPeak
67
tagAlign
51
bed broadPeak
45
bigBed broadPeak
3
tar
Organism
376
Homo sapiens
Biosample type
294
cell line
82
tissue
primary cell
Organ
294
liver
82
brain
Project
376
AMP
Genome assembly (visualization)
257
GRCh38
251
hg19
Lab
376
AMP-T2D consortium
Audit category:
7
missing controlled_by
Audit category:
inconsistent control read length
4
inconsistent control run_type
biosample_type!
primary cell
audit.WARNING.category!
inconsistent control read length
BIOSAMPLE
ASSAY
376 results
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Clear Filters
ChIP-seq
cell line
HepG2
294
tissue
layer of hippocampus
22
caudate nucleus
15
substantia nigra
15
cingulate gyrus
14
middle frontal area 46
14
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