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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
14
ChIP-seq
1
CRISPR RNA-seq
1
CRISPRi RNA-seq
1
Hi-C
1
shRNA RNA-seq
1
siRNA RNA-seq
Assay category
14
DNA binding
4
Transcription
1
3D chromatin structure
Target of assay
13
histone
13
histone modification
9
narrow histone mark
4
broad histone mark
1
transcription factor
Date released
270
August, 2021
205
February, 2023
176
May, 2022
143
February, 2021
129
August, 2017
122
May, 2021
64
October, 2019
59
September, 2020
58
May, 2020
48
March, 2020
47
September, 2023
26
July, 2019
25
February, 2020
19
April, 2020
16
January, 2021
15
May, 2023
14
November, 2017
10
November, 2020
8
January, 2018
8
October, 2017
7
August, 2020
5
December, 2019
5
March, 2023
4
July, 2018
4
March, 2019
4
October, 2022
2
November, 2019
1
April, 2019
1
August, 2018
1
August, 2022
1
December, 2018
1
November, 2018
1
September, 2018
Available data
bam
334
bigWig
324
fastq
313
bed narrowPeak
312
bigBed narrowPeak
78
tagAlign
70
bed broadPeak
64
bigBed broadPeak
3
tar
1
hic
Organism
15
Homo sapiens
Biosample type
13
tissue
3
cell line
2
stem cell
1
primary cell
Organ
13
brain
1
liver
Project
14
AMP
4
community
1
ITG
Genome assembly (visualization)
1
GRCh38
1
hg19
Lab
14
AMP-T2D consortium
4
Anna Gloyn, Oxford
1
ITG
files.file_type!
bam
BIOSAMPLE
ASSAY
19 results
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Clear Filters
ChIP-seq
CRISPR RNA-seq
CRISPRi RNA-seq
Hi-C
shRNA RNA-seq
siRNA RNA-seq
tissue
cingulate gyrus
6
layer of hippocampus
3
substantia nigra
2
caudate nucleus
1
middle frontal area 46
1
cell line
EndoC-BH1
1
1
HepG2
1
stem cell
SB Ad3.1
1
1
primary cell
chondrocytes
1
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