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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
55
ATAC-seq
14
ChIP-seq
2
total RNA-seq
1
pCHi-C
Assay category
55
DNA accessibility
14
DNA binding
2
Transcription
Target of assay
13
histone
13
histone modification
9
narrow histone mark
4
broad histone mark
1
transcription factor
Date released
270
August, 2021
205
February, 2023
176
May, 2022
143
February, 2021
129
August, 2017
122
May, 2021
64
October, 2019
59
September, 2020
58
May, 2020
48
March, 2020
47
September, 2023
26
July, 2019
25
February, 2020
19
April, 2020
16
January, 2021
15
May, 2023
14
November, 2017
10
November, 2020
8
January, 2018
8
October, 2017
7
August, 2020
5
December, 2019
5
March, 2023
4
July, 2018
4
March, 2019
4
October, 2022
2
November, 2019
1
April, 2019
1
August, 2018
1
August, 2022
1
December, 2018
1
November, 2018
1
September, 2018
Available data
bam
594
bigWig
340
bed narrowPeak
324
fastq
312
bigBed narrowPeak
189
tsv
128
tagAlign
70
bed broadPeak
64
bigBed broadPeak
3
tar
Organism
72
Homo sapiens
Biosample type
57
primary cell
13
tissue
2
cell line
Organ
13
brain
2
liver
Project
72
AMP
Genome assembly (visualization)
1
hg19
Lab
72
AMP-T2D consortium
files.file_type!
bam
BIOSAMPLE
ASSAY
72 results
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Clear Filters
ATAC-seq
ChIP-seq
total RNA-seq
pCHi-C
primary cell
naive thymus-derived CD4-positive, alpha-beta T cell
22
1
CD4-positive, alpha-beta memory T cell
22
macrophage
11
neutrophil
1
tissue
cingulate gyrus
6
layer of hippocampus
3
substantia nigra
2
caudate nucleus
1
middle frontal area 46
1
cell line
HepG2
1
1
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